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Milot Mirdita, Konstantin Schütze, Yoshitaka Moriwaki, Lim Heo, Sergey Ovchinnikov, Martin Steinegger
ColabFold offers accelerated prediction of protein structures and complexes by combining the fast homology search of MMseqs2 with AlphaFold2 or RoseTTAFold. ColabFold's 40-60-fold faster search and optimized model utilization enables prediction of close to 1,000 structures per day on a server with one graphics processing unit. Coupled with Google Colaboratory, ColabFold becomes a free and accessible platform for protein folding. ColabFold is open-source software available at https://github.com/sokrypton/ColabFold and its novel environmental databases are available at https://colabfold.mmseqs.com .
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Mirdita, M., Schütze, K., Moriwaki, Y., Heo, L., Ovchinnikov, S., & Steinegger, M. (2022). ColabFold: making protein folding accessible to all. Nature Methods, 19(6), 679–682. https://doi.org/10.1038/s41592-022-01488-1
Mirdita, Milot, et al. "ColabFold: making protein folding accessible to all." Nature Methods, vol. 19, no. 6, 2022, pp. 679–682, https://doi.org/10.1038/s41592-022-01488-1.
Mirdita, Milot, Konstantin Schütze, Yoshitaka Moriwaki, Lim Heo, Sergey Ovchinnikov, and Martin Steinegger. "ColabFold: making protein folding accessible to all." Nature Methods 19, no. 6 (2022): 679–682. https://doi.org/10.1038/s41592-022-01488-1.
Mirdita M., Schütze K., Moriwaki Y. [и др.] ColabFold: making protein folding accessible to all // Nature Methods. — 2022. — Vol. 19, № 6. — P. 679–682. — URL: https://doi.org/10.1038/s41592-022-01488-1
@article{mirdita2022colabfold,
title = {{ColabFold: making protein folding accessible to all}},
author = {Milot Mirdita and Konstantin Schütze and Yoshitaka Moriwaki and Lim Heo and Sergey Ovchinnikov and Martin Steinegger},
journal = {Nature Methods},
year = {2022},
volume = {19},
number = {6},
pages = {679--682},
doi = {10.1038/s41592-022-01488-1},
url = {https://doi.org/10.1038/s41592-022-01488-1}
}TY - JOUR AU - Mirdita, Milot AU - Schütze, Konstantin AU - Moriwaki, Yoshitaka AU - Heo, Lim AU - Ovchinnikov, Sergey AU - Steinegger, Martin TI - ColabFold: making protein folding accessible to all JO - Nature Methods VL - 19 IS - 6 SP - 679 EP - 682 PY - 2022 DA - 2022/05/30 DO - 10.1038/s41592-022-01488-1 UR - https://doi.org/10.1038/s41592-022-01488-1 ER -
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