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Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulytė, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A Thiessen, Bo Yu and 3 more
PubChem (https://pubchem.ncbi.nlm.nih.gov) is a popular chemical information resource that serves a wide range of use cases. In the past two years, a number of changes were made to PubChem. Data from more than 120 data sources was added to PubChem. Some major highlights include: the integration of Google Patents data into PubChem, which greatly expanded the coverage of the PubChem Patent data collection; the creation of the Cell Line and Taxonomy data collections, which provide quick and easy access to chemical information for a given cell line and taxon, respectively; and the update of the bioassay data model. In addition, new functionalities were added to the PubChem programmatic access protocols, PUG-REST and PUG-View, including support for target-centric data download for a given protein, gene, pathway, cell line, and taxon and the addition of the 'standardize' option to PUG-REST, which returns the standardized form of an input chemical structure. A significant update was also made to PubChemRDF. The present paper provides an overview of these changes.
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Kim, S., Chen, J., Cheng, T., Gindulytė, A., He, J., He, S., Li, Q., Shoemaker, B. A., Thiessen, P. A., Yu, B., Zaslavsky, L. Y., Zhang, J., & Bolton, E. (2022). PubChem 2023 update. Nucleic Acids Research, 51(D1), D1373–D1380. https://doi.org/10.1093/nar/gkac956
Kim, Sunghwan, et al. "PubChem 2023 update." Nucleic Acids Research, vol. 51, no. D1, 2022, pp. D1373–D1380, https://doi.org/10.1093/nar/gkac956.
Kim, Sunghwan, Jie Chen, Tiejun Cheng, Asta Gindulytė, Jia He, Siqian He, Qingliang Li, et al. "PubChem 2023 update." Nucleic Acids Research 51, no. D1 (2022): D1373–D1380. https://doi.org/10.1093/nar/gkac956.
Kim S., Chen J., Cheng T. [и др.] PubChem 2023 update // Nucleic Acids Research. — 2022. — Vol. 51, № D1. — P. D1373–D1380. — URL: https://doi.org/10.1093/nar/gkac956
@article{kim2022pubchem,
title = {{PubChem 2023 update}},
author = {Sunghwan Kim and Jie Chen and Tiejun Cheng and Asta Gindulytė and Jia He and Siqian He and Qingliang Li and Benjamin A. Shoemaker and Paul A Thiessen and Bo Yu and Leonid Yu. Zaslavsky and Jian Zhang and Evan Bolton},
journal = {Nucleic Acids Research},
year = {2022},
volume = {51},
number = {D1},
pages = {D1373--D1380},
doi = {10.1093/nar/gkac956},
url = {https://doi.org/10.1093/nar/gkac956}
}TY - JOUR AU - Kim, Sunghwan AU - Chen, Jie AU - Cheng, Tiejun AU - Gindulytė, Asta AU - He, Jia AU - He, Siqian AU - Li, Qingliang AU - Shoemaker, Benjamin A. AU - Thiessen, Paul A AU - Yu, Bo AU - Zaslavsky, Leonid Yu. AU - Zhang, Jian AU - Bolton, Evan TI - PubChem 2023 update JO - Nucleic Acids Research VL - 51 IS - D1 SP - D1373 EP - D1380 PY - 2022 DA - 2022/10/13 DO - 10.1093/nar/gkac956 UR - https://doi.org/10.1093/nar/gkac956 ER -
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