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Jon Agirre, Mihaela Atanasova, Haroldas Bagdonas, Charles C. Ballard, Arnaud Baslé, James Beilsten‐Edmands, Rafael J. Borges, David G. Brown, J. Javier Burgos-Mármol, John M. Berrisford and 84 more
The Collaborative Computational Project No. 4 (CCP4) is a UK-led international collective with a mission to develop, test, distribute and promote software for macromolecular crystallography. The CCP4 suite is a multiplatform collection of programs brought together by familiar execution routines, a set of common libraries and graphical interfaces. The CCP4 suite has experienced several considerable changes since its last reference article, involving new infrastructure, original programs and graphical interfaces. This article, which is intended as a general literature citation for the use of the CCP4 software suite in structure determination, will guide the reader through such transformations, offering a general overview of the new features and outlining future developments. As such, it aims to highlight the individual programs that comprise the suite and to provide the latest references to them for perusal by crystallographers around the world.
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Agirre, J., Atanasova, M., Bagdonas, H., Ballard, C. C., Baslé, A., Beilsten‐Edmands, J., Borges, R. J., Brown, D. G., Burgos-Mármol, J. J., Berrisford, J. M., Bond, P. S., Caballero, I., Catapano, L., Chojnowski, G., Cook, A. G., Cowtan, K. D., Croll, T. I., Debreczeni, J., Devenish, N. E., … Yamashita, K. (2023). The CCP 4 suite: integrative software for macromolecular crystallography. Acta Crystallographica Section D Structural Biology, 79(6), 449–461. https://doi.org/10.1107/s2059798323003595
Agirre, Jon, et al. "The CCP 4 suite: integrative software for macromolecular crystallography." Acta Crystallographica Section D Structural Biology, vol. 79, no. 6, 2023, pp. 449–461, https://doi.org/10.1107/s2059798323003595.
Agirre, Jon, Mihaela Atanasova, Haroldas Bagdonas, Charles C. Ballard, Arnaud Baslé, James Beilsten‐Edmands, Rafael J. Borges, et al. "The CCP 4 suite: integrative software for macromolecular crystallography." Acta Crystallographica Section D Structural Biology 79, no. 6 (2023): 449–461. https://doi.org/10.1107/s2059798323003595.
Agirre J., Atanasova M., Bagdonas H. [и др.] The CCP 4 suite: integrative software for macromolecular crystallography // Acta Crystallographica Section D Structural Biology. — 2023. — Vol. 79, № 6. — P. 449–461. — URL: https://doi.org/10.1107/s2059798323003595
@article{agirre2023suite,
title = {{The CCP 4 suite: integrative software for macromolecular crystallography}},
author = {Jon Agirre and Mihaela Atanasova and Haroldas Bagdonas and Charles C. Ballard and Arnaud Baslé and James Beilsten‐Edmands and Rafael J. Borges and David G. Brown and J. Javier Burgos-Mármol and John M. Berrisford and Paul S. Bond and Iracema Caballero and Lucrezia Catapano and Grzegorz Chojnowski and Atlanta G. Cook and Kevin D. Cowtan and Tristan Ian Croll and J.E. Debreczeni and N. E. Devenish and Eleanor Joy Dodson and Tarik R. Drevon and Paul Emsley and Gwyndaf Evans and Phil R. Evans and Maria S. Fando and James Foadi and Luis Fuentes‐Montero and Elspeth F. Garman and Markus Gerstel and Richard J. Gildea and Kaushik S. Hatti and Maarten L. Hekkelman and Philipp Heuser and Soon Wen Hoh and Michael A. Hough and Huw T. Jenkins and Elisabet Jiménez and Robbie P. Joosten and Ronan M. Keegan and N.H. Keep and Eugene Krissinel and Petr Kolenko and Oleg V. Kovalevskiy and Victor S. Lamzin and David M. Lawson and Andrey A. Lebedev and Andrew G. W. Leslie and Bernhard Lohkamp and Fei Long and Martin Malý and Airlie J. McCoy and Stuart J. McNicholas and Ana Medina and Claudia Millán and James W. Murray and Garib N. Murshudov and Robert A. Nicholls and Martin E. M. Noble and Robert D. Oeffner and Navraj S. Pannu and James M. Parkhurst and Nicholas M. Pearce and Joana Pereira and Anastassis Perrakis A and Harold R. Powell and Randy J. Read and Daniel John Rigden and William Rochira and Massimo Domenico Sammito and Filomeno Sánchez Rodríguez and George M. Sheldrick and Kathryn L. Shelley and Felix Šimkovic and Adam J. Simpkin and Pavol Skubák and E. V. Sobolev and Roberto A. Steiner and Kyle Stevenson and Ivo Tews and Jens M. H. Thomas and Andrea Thorn and Josep Triviño and Ville Uski and Isabel Usón and Alexei A. Vagin and Sameer S Velankar and Melanie Vollmar and Helen Walden and David Geoffrey Waterman and Keith S. Wilson and Martyn Winn and Graeme Winter and Marcin Wojdyr and Keitaro Yamashita},
journal = {Acta Crystallographica Section D Structural Biology},
year = {2023},
volume = {79},
number = {6},
pages = {449--461},
doi = {10.1107/s2059798323003595},
url = {https://doi.org/10.1107/s2059798323003595}
}TY - JOUR AU - Agirre, Jon AU - Atanasova, Mihaela AU - Bagdonas, Haroldas AU - Ballard, Charles C. AU - Baslé, Arnaud AU - Beilsten‐Edmands, James AU - Borges, Rafael J. AU - Brown, David G. AU - Burgos-Mármol, J. Javier AU - Berrisford, John M. AU - Bond, Paul S. AU - Caballero, Iracema AU - Catapano, Lucrezia AU - Chojnowski, Grzegorz AU - Cook, Atlanta G. AU - Cowtan, Kevin D. AU - Croll, Tristan Ian AU - Debreczeni, J.E. AU - Devenish, N. E. AU - Dodson, Eleanor Joy AU - Drevon, Tarik R. AU - Emsley, Paul AU - Evans, Gwyndaf AU - Evans, Phil R. AU - Fando, Maria S. AU - Foadi, James AU - Fuentes‐Montero, Luis AU - Garman, Elspeth F. AU - Gerstel, Markus AU - Gildea, Richard J. AU - Hatti, Kaushik S. AU - Hekkelman, Maarten L. AU - Heuser, Philipp AU - Hoh, Soon Wen AU - Hough, Michael A. AU - Jenkins, Huw T. AU - Jiménez, Elisabet AU - Joosten, Robbie P. AU - Keegan, Ronan M. AU - Keep, N.H. AU - Krissinel, Eugene AU - Kolenko, Petr AU - Kovalevskiy, Oleg V. AU - Lamzin, Victor S. AU - Lawson, David M. AU - Lebedev, Andrey A. AU - Leslie, Andrew G. W. AU - Lohkamp, Bernhard AU - Long, Fei AU - Malý, Martin AU - McCoy, Airlie J. AU - McNicholas, Stuart J. AU - Medina, Ana AU - Millán, Claudia AU - Murray, James W. AU - Murshudov, Garib N. AU - Nicholls, Robert A. AU - Noble, Martin E. M. AU - Oeffner, Robert D. AU - Pannu, Navraj S. AU - Parkhurst, James M. AU - Pearce, Nicholas M. AU - Pereira, Joana AU - A, Anastassis Perrakis AU - Powell, Harold R. AU - Read, Randy J. AU - Rigden, Daniel John AU - Rochira, William AU - Sammito, Massimo Domenico AU - Rodríguez, Filomeno Sánchez AU - Sheldrick, George M. AU - Shelley, Kathryn L. AU - Šimkovic, Felix AU - Simpkin, Adam J. AU - Skubák, Pavol AU - Sobolev, E. V. AU - Steiner, Roberto A. AU - Stevenson, Kyle AU - Tews, Ivo AU - Thomas, Jens M. H. AU - Thorn, Andrea AU - Triviño, Josep AU - Uski, Ville AU - Usón, Isabel AU - Vagin, Alexei A. AU - Velankar, Sameer S AU - Vollmar, Melanie AU - Walden, Helen AU - Waterman, David Geoffrey AU - Wilson, Keith S. AU - Winn, Martyn AU - Winter, Graeme AU - Wojdyr, Marcin AU - Yamashita, Keitaro TI - The CCP 4 suite: integrative software for macromolecular crystallography JO - Acta Crystallographica Section D Structural Biology VL - 79 IS - 6 SP - 449 EP - 461 PY - 2023 DA - 2023/05/04 DO - 10.1107/s2059798323003595 UR - https://doi.org/10.1107/s2059798323003595 ER -
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